“Wikipathways” Menu is been added under “Plugins” menu of WikiPathways.

Now we have

1

 

Basic Browse Functionality which enables user to

  • Browse pathways by species
  • Browse pathways by Collections
  • Browse pathways by Curation tags

Details 

1.    Browse pathways by species

http://www.wikipathways.org/wpi/webservice/webservice.php/findPathwaysByText?query=%22%22&species=Homo%20sapiens

2.Browse pathways by curation tags

http://www.wikipathways.org/wpi/webservice/webservice.php/getCurationTagsByName?tagName=Curation:FeaturedPathway

Collections List includes: Curated pathways (default), Featured pathways, GenMAPP pathways, CIRM pathways, Reactome pathways, Open Access pathways, WormBase pathways , Wikipedia pathways ,All pathways(inlcudes all  the pathways present in Collection List)

Curation Tags List includes: Not specified (default), missing annotations,unconnected lines,under construction, stub, needs work

Step by step demonstration of task:

  • Browse pathways by Collections and Species:

2

  •   Browse pathways by Curation tags and Species:

3

  •  Browse by Collections:

4

  • Browse By CurationTags:

 5

 

 

Leave a reply

<a href="" title=""> <abbr title=""> <acronym title=""> <b> <blockquote cite=""> <cite> <code> <del datetime=""> <em> <i> <q cite=""> <s> <strike> <strong> 

required